Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGACCTCAGTTGTT
..(((((((.((((...((((&)))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243328
GeneSymbolRAET1E
Binding site285,302
Score0.846
Seed1
Au0.456
Energy-17.8
Binding len17
Me-7.168
Phylopstem0.05468400000000003
Phylopflank-0.206307935
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end5
Position5UTR
2D Structure