Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCAGGAGCTGCAGC
((((((((.(.(((((.....&))))).).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363254
GeneSymbolCCDC200
Binding site146,163
Score0.923
Seed1
Au0.441
Energy-20.5
Binding len17
Me-7.819
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure