Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGCAGCCGTAGGAGA
...(..((((((((((..(((&)))..))))))))))..).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243349
GeneSymbolSH3D19
Binding site792,811
Score0.923
Seed0
Au0.397
Energy-20.2
Binding len19
Me-12.535
Phylopstem0.6749138929999999
Phylopflank0.2696015385000001
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end6
Position5UTR
2D Structure