Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCCTCCCGAGCTGCC
..((((((.(((..(..((((&))))..)..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243351
GeneSymbolNUB1
Binding site1631,1650
Score0.892
Seed1
Au0.353
Energy-19.8
Binding len19
Me-8.392
Phylopstem2.377110833333333
Phylopflank1.7793174011250001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure