Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTCTCGAAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTG
((.((((((((((((.((((((&.))))))..)))))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001243372
GeneSymbolCLCN3
Binding site3639,3686
Score0.923
Seed0
Au0.544
Energy-23.2
Binding len25
Me-5.728
Phylopstem0.8531090916666666
Phylopflank0.7404647675000002
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end7
Position3UTR
2D Structure