Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCTTGCTGCAGCAGGGAT
((.(.((((((((.((((((.&))))))..)))))))).).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243374
GeneSymbolCLCN3
Binding site31,53
Score1.0
Seed0
Au0.588
Energy-23.0
Binding len22
Me-10.471
Phylopstem1.85379625
Phylopflank2.102801496206897
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end6
Position5UTR
2D Structure