Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTATCAGCTGCCTCAGCTGCAGG
(((((((((.(((.((.....&.)).))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243374
GeneSymbolCLCN3
Binding site987,1011
Score0.846
Seed1
Au0.515
Energy-21.8
Binding len18
Me-6.037
Phylopstem5.962181111111112
Phylopflank5.934214071249999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure