Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACAACCACCCGCTAGCTGA
...(((((((((((((.((((&))))))))))....)).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243403
GeneSymbolCLEC16A
Binding site1699,1722
Score0.846
Seed0
Au0.456
Energy-20.3
Binding len23
Me-6.515
Phylopstem4.916877060555555
Phylopflank3.683750032125
Longest consecutive pairings10
Position of longest consecutive pairings13
Pairings in 3prime end7
PositionCDS
2D Structure