Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGCTCGGAGCAGCAGCGGCCGCGGCGGCGGG
((((.(((((((((((.....&.))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243425
GeneSymbolTTC39C
Binding site121,155
Score0.846
Seed0
Au0.191
Energy-24.4
Binding len18
Me-8.057
Phylopstem2.532993372727272
Phylopflank0.6005574449999999
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end3
PositionCDS
2D Structure