Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAACCCAGGAGCAGG
((((..(((.((((((.((((&)))))))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243428
GeneSymbolERG
Binding site4859,4879
Score0.846
Seed0
Au0.353
Energy-21.6
Binding len20
Me-11.2
Phylopstem0.6294337833333333
Phylopflank1.6623521349999997
Longest consecutive pairings13
Position of longest consecutive pairings7
Pairings in 3prime end7
Position3UTR
2D Structure