Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGAACAGCTGAGCAGAACCAGCCTAAAGCTGCAAG
((((((((.(((((((..(((&)))..)))))))................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243438
GeneSymbolSPECC1
Binding site1790,1827
Score0.846
Seed1
Au0.515
Energy-20.7
Binding len37
Me-4.994
Phylopstem2.718768375
Phylopflank3.442614115000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure