Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGTTAGTGCATCCCAGCTGCAGC
(((((((((.((.(((((((.&))).....)))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243439
GeneSymbolSPECC1
Binding site5039,5064
Score1.0
Seed1
Au0.441
Energy-22.4
Binding len25
Me-6.469
Phylopstem-0.3657916
Phylopflank-0.22461834125000002
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure