Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTGCAGAGGTGGCAACTGGGCTGCAC
.(((((((.((((((((((((&)))))..........)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243439
GeneSymbolSPECC1
Binding site4957,4987
Score0.923
Seed1
Au0.412
Energy-22.3
Binding len30
Me-4.85
Phylopstem-0.54305665
Phylopflank-0.41344784625000003
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure