Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTTATAGGCAGCTGTG
..((((((((..(((((((.(&).))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243532
GeneSymbolPDIK1L
Binding site3811,3829
Score1.0
Seed1
Au0.618
Energy-18.8
Binding len18
Me-11.129
Phylopstem1.78561525
Phylopflank1.92549756125
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure