Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTTATAGGCAGCTGTG
..((((((((..(((((((.(&).))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243533
GeneSymbolPDIK1L
Binding site3835,3853
Score1.0
Seed1
Au0.618
Energy-18.8
Binding len18
Me-11.129
Phylopstem2.1332972499999996
Phylopflank1.8389812862500001
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure