Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCCAAACTGCAGTCTTGTAT
.(((((((((((((...(((.&)))....)))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243650
GeneSymbolGFOD2
Binding site955,978
Score1.0
Seed1
Au0.426
Energy-18.6
Binding len23
Me-4.762
Phylopstem0.3435690666666667
Phylopflank0.016111371375000023
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end4
Position3UTR
2D Structure