Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGCGGCGGCTGCC
..((((((((.(((((.....&))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243718
GeneSymbolRAB6A
Binding site254,269
Score0.923
Seed1
Au0.294
Energy-23.1
Binding len15
Me-7.782
Phylopstem3.4723625000000005
Phylopflank2.5629387487500006
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure