Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGCGGCAGCTGTGGA
((((((((((.(((((.....&))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243718
GeneSymbolRAB6A
Binding site23,40
Score0.846
Seed1
Au0.279
Energy-22.6
Binding len17
Me-6.762
Phylopstem1.8876935399999997
Phylopflank0.9379397235526314
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure