Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGTGATTCTGCTGCAGCTGTAGT
(((((((((((((.(...((.&))......).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243719
GeneSymbolRAB6A
Binding site226,250
Score0.923
Seed1
Au0.603
Energy-21.5
Binding len24
Me-5.027
Phylopstem2.9487229230769234
Phylopflank2.304176925
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure