Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAATTCTTCTCCACGACAATGCCCGACCGCATGTTGCAC
.((((((((((((((...(((&.))))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243723
GeneSymbolSETMAR
Binding site1329,1371
Score1.0
Seed1
Au0.544
Energy-23.5
Binding len20
Me-4.026
Phylopstem0.1922012
Phylopflank0.21986226250000002
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure