Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATTTTGCACAGTGTAACAGCGCAGTTGCAT
.(((((((((.(((((.....&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243728
GeneSymbolATPAF1
Binding site1238,1268
Score0.923
Seed1
Au0.544
Energy-21.0
Binding len16
Me-6.618
Phylopstem2.4655074444444445
Phylopflank3.1726834224999996
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure