Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTACAGGGCTCAGCATTGCTGACCAGATCACTCTGCTCAAAGCTGCC
..(((((((((((((((((((&)))))))))..........................))))....)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243730
GeneSymbolRARG
Binding site867,917
Score0.846
Seed1
Au0.485
Energy-18.0
Binding len50
Me-4.957
Phylopstem0.5378198163265304
Phylopflank0.8876857875
Longest consecutive pairings9
Position of longest consecutive pairings41
Pairings in 3prime end8
PositionCDS
2D Structure