Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTTTGCCTGGCCGCAACCCGCCAGCCTGCAAT
((((((((((((((((.((((&.))))....)))))).)).))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243732
GeneSymbolRARG
Binding site378,413
Score1.0
Seed1
Au0.456
Energy-22.0
Binding len29
Me-3.938
Phylopstem1.5552049789473685
Phylopflank1.284780005
Longest consecutive pairings6
Position of longest consecutive pairings14
Pairings in 3prime end7
PositionCDS
2D Structure