Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCACTCCTGCAGCTGG
...(((((((((..((..(((&)))..))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243733
GeneSymbolVEGFB
Binding site280,299
Score0.846
Seed0
Au0.235
Energy-22.2
Binding len19
Me-8.661
Phylopstem0.5528175555555556
Phylopflank0.4918386399999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure