Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTTCAGCCTCCAATGCTGCAGT
(((((((((.(((((.(((((&))))).)))))..))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243737
GeneSymbolTRAPPC13
Binding site365,390
Score0.846
Seed1
Au0.574
Energy-19.3
Binding len25
Me-5.413
Phylopstem4.295421636363636
Phylopflank4.40665493625
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure