Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGCGACCGCGGG
......((((((((((..(((&)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243744
GeneSymbolFANCC
Binding site41,57
Score0.846
Seed0
Au0.412
Energy-21.3
Binding len16
Me-15.567
Phylopstem0.10928949999999997
Phylopflank0.13523434569444445
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure