Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGACAGGCCTCCTCCCGCAAGCTGCT
..((((((((((..(..((((&.)))).)..))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243752
GeneSymbolCYREN
Binding site1663,1692
Score0.846
Seed1
Au0.412
Energy-22.1
Binding len21
Me-7.336
Phylopstem-0.6790509636363634
Phylopflank-0.7839238029054054
Longest consecutive pairings5
Position of longest consecutive pairings7
Pairings in 3prime end5
Position3UTR
2D Structure