Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGACAGGCCTCCTCCCGCAAGCTGCT
..((((((((((..(..((((&.)))).)..))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243754
GeneSymbolCYREN
Binding site1067,1096
Score0.846
Seed1
Au0.412
Energy-22.1
Binding len21
Me-7.336
Phylopstem0.8357417254545456
Phylopflank0.65429032825
Longest consecutive pairings5
Position of longest consecutive pairings7
Pairings in 3prime end5
Position3UTR
2D Structure