Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTCAGCCCTCAACACGCTGTGGCATCCTGAGTGCTTTGTGTGCCGGGA
.((((((((((((.(((.....&.))).)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001243756
GeneSymbolPXN
Binding site1604,1654
Score1.0
Seed1
Au0.426
Energy-23.2
Binding len18
Me-4.65
Phylopstem0.5378177833333334
Phylopflank0.27313473875
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure