Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CGACCGCCTGCTGCT
..(((((.(((((((......&)))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243756
GeneSymbolPXN
Binding site535,550
Score0.923
Seed0
Au0.412
Energy-21.2
Binding len15
Me-7.504
Phylopstem0.5043282857142858
Phylopflank0.002293097499999952
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end2
PositionCDS
2D Structure