Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGATAGTCTGGTCTGGAGCTGGGACAGCAGCTGCTGCTGTGGA
(((((((.((((((((.....&.)))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243763
GeneSymbolRABGAP1L
Binding site128,175
Score0.923
Seed1
Au0.441
Energy-21.2
Binding len18
Me-6.251
Phylopstem0.74000875
Phylopflank0.5345784199999999
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end3
Position5UTR
2D Structure