Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGTGCAGTTGCC
..(((((((((....((((((&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243764
GeneSymbolRABGAP1L
Binding site2826,2842
Score0.923
Seed1
Au0.603
Energy-19.0
Binding len16
Me-11.185
Phylopstem0.4053491111111111
Phylopflank0.6235205862500002
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure