Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTTAAGTTTTCAGGATTTATTCAGATAAAGCACACTGTGGGGCCAGGC
.((((((.((((.(((......&.))).))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001243765
GeneSymbolRABGAP1L
Binding site2129,2179
Score0.846
Seed1
Au0.485
Energy-17.3
Binding len18
Me-7.396
Phylopstem1.4291351666666667
Phylopflank0.5898574525
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure