Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGTCGCCGCCGGCGCTTCTGCAGCAAAGTTGAGGGCTATGGAAGTGTATGCAGCTGCAAG
(((((((((((((((((((((&.)))).))))))........................))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243766
GeneSymbolPOMGNT1
Binding site1435,1497
Score0.846
Seed1
Au0.456
Energy-23.7
Binding len48
Me-3.938
Phylopstem5.029340102173913
Phylopflank4.49653579625
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure