Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACATTGTAACCTTTCTGACAGGGCTGCTGCGGTGCAC
.((((.((((((((((((((.&)))))))......................))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243767
GeneSymbolBTF3L4
Binding site3682,3723
Score0.846
Seed0
Au0.544
Energy-20.7
Binding len41
Me-5.694
Phylopstem0.4216478594444444
Phylopflank0.32391038800000005
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure