Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCACAAGAATGTTGTATGCTTGGGGTG
((((((((((((((((......&.))))))))))))..)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001243775
GeneSymbolLIMA1
Binding site986,1016
Score1.0
Seed1
Au0.574
Energy-18.1
Binding len20
Me-3.938
Phylopstem0.45407783333333324
Phylopflank0.2535290050000001
Longest consecutive pairings12
Position of longest consecutive pairings7
Pairings in 3prime end2
Position5UTR
2D Structure