Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCTGCAAGTGCTACTGGCAACAGCCTGAGGGCAGCTGTAGA
((((((((((((((((.....&.)))))).....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363460
GeneSymbolCALN1
Binding site2453,2497
Score0.923
Seed1
Au0.5
Energy-22.7
Binding len23
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure