Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCATTACCACAAGCTCTGCTGCT
..(((((((.(((((((((((&))))))))..))).))......))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243775
GeneSymbolLIMA1
Binding site950,978
Score0.923
Seed1
Au0.603
Energy-18.6
Binding len28
Me-6.2
Phylopstem0.39019524615384604
Phylopflank0.6807757224999997
Longest consecutive pairings8
Position of longest consecutive pairings20
Pairings in 3prime end8
Position5UTR
2D Structure