Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAGGCTAGAGTGTAATTAGTGGCCCCAGTCATGGCTCACTGCAGCTGCAAA
(((((((((((((.((.....&.))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243781
GeneSymbolPRXL2A
Binding site4185,4239
Score1.0
Seed1
Au0.456
Energy-24.4
Binding len19
Me-4.794
Phylopstem-0.44338813846153846
Phylopflank0.03222925750000002
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure