Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TAGCCCAGCTGTGAA
(((((((((.(((((......&)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243785
GeneSymbolRAG2
Binding site1085,1100
Score0.846
Seed1
Au0.485
Energy-18.5
Binding len15
Me-5.413
Phylopstem5.253427333333335
Phylopflank3.316129845
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure