Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TAGCCCAGCTGTGAA
(((((((((.(((((......&)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243786
GeneSymbolRAG2
Binding site1279,1294
Score0.923
Seed1
Au0.485
Energy-18.5
Binding len15
Me-5.413
Phylopstem4.297694222222222
Phylopflank3.0970587287500004
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure