Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTTCATTGTTGGCCAGGG
.((((((..((((((.(((...&))).))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001243788
GeneSymbolSMUG1
Binding site1899,1918
Score0.846
Seed1
Au0.441
Energy-23.3
Binding len19
Me-7.396
Phylopstem1.6014418333333333
Phylopflank2.26295133
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end4
Position3UTR
2D Structure