Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACTCCTGCTGAGCTGCC
..((((((((((..(((((((&)))))))..))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243788
GeneSymbolSMUG1
Binding site580,602
Score0.923
Seed1
Au0.368
Energy-24.6
Binding len22
Me-7.103
Phylopstem-0.04094858333333332
Phylopflank-0.052784436250000004
Longest consecutive pairings7
Position of longest consecutive pairings15
Pairings in 3prime end7
PositionCDS
2D Structure