Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTATGGGAGGCTGCAGCTGGAT
.(.(((((((((((((((((.&))))))....))))))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243789
GeneSymbolSMUG1
Binding site898,922
Score1.0
Seed0
Au0.544
Energy-22.0
Binding len24
Me-5.351
Phylopstem-0.4556204857142856
Phylopflank0.1358098425
Longest consecutive pairings11
Position of longest consecutive pairings3
Pairings in 3prime end7
PositionCDS
2D Structure