Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTTGCCCAGTTTCAGGCCCAGCTGCAGA
(((((((((.(((((((((.(&).))))).........))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243797
GeneSymbolTSC22D1
Binding site264,294
Score0.846
Seed1
Au0.324
Energy-22.0
Binding len30
Me-5.18
Phylopstem0.0666748772222222
Phylopflank0.18135320850000006
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure