Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAACCGCATAGCTGCC
..(((((((((((((......&))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243797
GeneSymbolTSC22D1
Binding site372,388
Score0.846
Seed1
Au0.338
Energy-21.4
Binding len16
Me-5.19
Phylopstem-0.08613914666666668
Phylopflank-0.292058344
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end2
PositionCDS
2D Structure