Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCTGCTGCTGTTAGCAGTGTTCCTAATGCAGCTGCAGG
(((((((((((((.((((((.&))).))).)))..................)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243799
GeneSymbolTSC22D1
Binding site1611,1651
Score0.846
Seed1
Au0.456
Energy-21.6
Binding len40
Me-4.794
Phylopstem2.7968896451612895
Phylopflank2.0223838499999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure