Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGCTGTCCGCAGCTGGGC
.(.(((((((((..((.((((&))))..))...))))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243876
GeneSymbolSPHK2
Binding site1459,1482
Score0.846
Seed0
Au0.294
Energy-23.7
Binding len23
Me-7.497
Phylopstem3.6741402222222224
Phylopflank1.9568334175000002
Longest consecutive pairings9
Position of longest consecutive pairings3
Pairings in 3prime end6
PositionCDS
2D Structure