Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCTACCTCGGCCGCCCCGGTTGCT
..(((((((((((((..((((&.)))))))))))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243876
GeneSymbolSPHK2
Binding site202,230
Score1.0
Seed1
Au0.368
Energy-21.6
Binding len22
Me-5.19
Phylopstem0.9068746937500001
Phylopflank0.42082599227500006
Longest consecutive pairings11
Position of longest consecutive pairings10
Pairings in 3prime end6
Position5UTR
2D Structure