Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTTTACATTGTTGCCCCTACATAAGGA
.(((((((.(((((((((((..&)))))))))))))))........))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001243879
GeneSymbolTRA2B
Binding site3610,3637
Score0.846
Seed1
Au0.662
Energy-17.9
Binding len27
Me-4.85
Phylopstem5.618163636363636
Phylopflank5.2387594125
Longest consecutive pairings15
Position of longest consecutive pairings12
Pairings in 3prime end6
Position3UTR
2D Structure